1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTCGGAGAAGCATTCCCAATGCCGGTATATCTGTCACTGCTGCCAATTATTGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGgtaagactatttgctgaaaaaaaaaaaaacaaggtttagatgagatttctcatactgtagacatttttaatacgatgtagaatttatcatttgtgtatatatatttttggtggttcaatattctaaatagagagaacacttgatgtttcag
species | Glycine max |
transcript | GLYMA15G11270.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTG GCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATATEST: gi|120496169|gb|EH224336.1|EH224336
genomic: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGgtaagactat ... gatgtttcagGCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATAT
EST: CGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTG -CGTTTATGGGGGCTATGATATCAAATTTGGCATTEST: gi|7145687|gb|AW507609.1|AW507609
genomic: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGgtaagactat ... gatgtttcagGC-TTTATGGGGGCTATGATATCAAATTTGGCATT
EST: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTG GCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATATEST: gi|7926235|gb|AW832261.1|AW832261
genomic: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGgtaagactat ... gatgtttcagGCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATAT
EST: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTG GCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATATEST: gi|7693055|gb|AW761153.1|AW761153
genomic: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGgtaagactat ... gatgtttcagGCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATAT
EST: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTG GCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATAT
genomic: TGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGgtaagactat ... gatgtttcagGCTTTATGGGGGCTATGATATCAAATTTGGCATTCGTCTTCCGCAATATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCGGAGAAGCATTCCCAATGCCGGTATATCTGTCACTGCTGCCAATTATTGGTGGTTGTGCATTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGgtaagactatttgctgaaaaaaaaaaaaacaaggtttagatgagatttctcatactgtagacatttttaatacgatgtagaatttatcatttgtgtatatatatttttggtggttcaatattctaaatagagagaacacttgatgtttcag
- - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA