1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCGGAGGAAGACCCTCCCATTGCACCAAAACACGTTTTACCGGCGTCATGCCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgcctcactttctacttggattgaaatgtcattcaaaacttgttgtttaattcgagaaacatttaataattctcgttttctattcagattgaa...
species | Glycine max |
transcript | GLYMA15G01150.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGG TTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGTEST: gi|21888474|gb|BQ741687.1|BQ741687
genomic: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgc ... gtgattgcagTTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGT
EST: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGG TTTTCATGGAGTTCCTGCAEST: gi|9820182|gb|BE555692.1|BE555692
genomic: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgc ... gtgattgcagTTTTCATGGAGTTCCTGCA
EST: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGG TTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGTEST: gi|9204520|gb|BE330744.1|BE330744
genomic: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgc ... gtgattgcagTTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGT
EST: CCCGAGGAGTCGAGTTTCCAGTCGATGATTGCGAAAGGGTGTACAATGGG TTTTCATGGAGTTCCTGCATAGGAGCGTCTACACTGGCGTTCTTTCTTGGTEST: gi|9820943|gb|BE556453.1|BE556453
genomic: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgc ... gtgattgcagTTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGT
EST: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGG TTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGTEST: gi|6913962|gb|AW395492.1|AW395492
genomic: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgc ... gtgattgcagTTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGT
EST: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGG TTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGTEST: gi|27425069|gb|CA936589.1|CA936589
genomic: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgc ... gtgattgcagTTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGT
EST: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGG TTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGT
genomic: CCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgc ... gtgattgcagTTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGGAGGAAGACCCTCCCATTGCACCAAAACACGTTTTACCGGCGTCATGCCCGAGGAGTCGAGTTTCCAGTCGAGGATTGCGAAAGGGTGTACAATGGGgtgattatgcctcactttctacttggattgaaatgtcattcaaaacttgttgtttaattcgagaaacatttaataattctcgttttctattcagattgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT