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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTGAAGTCCGAAGGACGAAGAAGAGATTTCTGACAGCGTAATCATGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGgtgagagctcggtcttttctaaacgcttatgaatcatcatgaatttttaatttgaatgtgtttgtgttaatccacggattgaagtttaagttcaagtgatgtttgatgcctgttctgcatttgtttcag

Basic information

species Glycine max
transcript GLYMA14G02530.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209712271|gb|BW668465.1|BW668465
EST:     TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGG                         TTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
genomic: TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGgtgagagctc ... tttgtttcagTTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
EST: gi|192298820|gb|FG991041.1|FG991041
EST:     TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGG                         TTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
genomic: TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGgtgagagctc ... tttgtttcagTTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
EST: gi|192326942|gb|FK019219.1|FK019219
EST:     TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGG                         TTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
genomic: TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGgtgagagctc ... tttgtttcagTTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
EST: gi|209710455|gb|BW657327.1|BW657327
EST:     TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGG                         TTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
genomic: TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGgtgagagctc ... tttgtttcagTTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
EST: gi|209703723|gb|BW670686.1|BW670686
EST:     TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGG                         TTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT
genomic: TGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGgtgagagctc ... tttgtttcagTTGCTTGGTCAGTCAGTTCAGAACATTCGGTCTGGCCCATCAGTTTCTGCT