1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGTGTTATCACACAGTGGGTCTGTCTTGTCTGCTCCATCTCCTAAACCTTGGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttggttcaagaaaataagcatgtatggttcacattactgtaattgagtggtccagagtttgatatatgcattcttcttttgatgtttcacaaca...
species | Glycine max |
transcript | GLYMA13G35120.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAG GCATATGAAATGCGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAGEST: gi|209713814|gb|BW684006.1|BW684006
genomic: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttgg ... tcctttttagGCATATGAAATGTGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAG
EST: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAG GCATATGAAATGCGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAGEST: gi|209717225|gb|BW657694.1|BW657694
genomic: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttgg ... tcctttttagGCATATGAAATGTGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAG
EST: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAG GCATATGAAATGCGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAGEST: gi|209711765|gb|BW678947.1|BW678947
genomic: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttgg ... tcctttttagGCATATGAAATGTGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAG
EST: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAG GCATATGAAATGCGTGATGCTGCGGCTGTTTTCCACAGTCAEST: gi|298191951|gb|HO036033.1|HO036033
genomic: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttgg ... tcctttttagGCATATGAAATGTGTGATGCTGCGGCTGTTTTCCACAGTCA
EST: GGCCGCACAAGCCTCCTAAGTGTAGTGATCGTGATCCACTTTTCAGGAAG GCATATGAAATGCGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAGEST: gi|298190687|gb|HO032808.1|HO032808
genomic: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttgg ... tcctttttagGCATATGAAATGTGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAG
EST: GGCCGCACAAGCCTCCTAAGTGTATTGATTGTGATCCACTTTTCAAGAAG GCATATGAAATGCGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAGEST: gi|209700267|gb|BW664493.1|BW664493
genomic: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttgg ... tcctttttagGCATATGAAATGTGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAG
EST: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAG GCATATGAAATGCGTGATGCTGCGGCTGTTTTC-ACAGTCACGGAATAGAG
genomic: GGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttgg ... tcctttttagGCATATGAAATGTGTGATGCTGCGGCTGTTTTCCACAGTCACGGAATAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTGTTATCACACAGTGGGTCTGTCTTGTCTGCTCCATCTCCTAAACCTTGGCCGCACAAGCCTCCTAAGTGTAGTGATTGTGATCCACTTTTCAAGAAGgtaagtttggttcaagaaaataagcatgtatggttcacattactgtaattgagtggtccagagtttgatatatgcattcttcttttgatgtttcacaaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG