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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCTGATTGGCCAGCAGACCTTGATGAGAGCCCTAATGAACTTGAGTGGTGGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGAGTATTACAGGgtattggtgctatcccatggtccatctcagattattattctgatgtattttcataccctaacctgaatagagatatattgatttttctgagatatggatg...

Basic information

species Glycine max
transcript GLYMA07G33200.2
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA07G33200.2 (Glycine max), 5'ss of exon 2
lower sequence: Vv03s0063g01030.t01 (Vitis vinifera), 5'ss of exon 2
TCCTGATTGGCCAGCAGACCTTGATGAGAGCCCTAATGAACTTGAGTGGTGGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGAGTATTACAGGgtattgg-tgctatcccatggtccatctcagattattattctgat--gtattttcataccctaacctgaatagagatatattg-atttttctgagatatggatg
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TCCTGATTGGCCAGCAGACCTTGATGAGAATCCTAATGACCTCTCTTGGTGGACAAATGCCGTAGATTCTGTGAAGGCTTTTGGGAATGAACATTTCAAGgtaacgggtgcaaatttatggc---tctcatacttttgaagcaattggaggtttcaaattctttgtaaaagaaaaggaatttacaaactccaaggattttttt-