Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|22541522|gb|BU091365.1|BU091365EST: TCGCTTGATCAGCACCAATGCTGT-CCTGTGGA-ACACACGTGTTGGCGG ATTGC-ACCCAGTATCTCTTACCTGAGCTTGC
genomic: TCGCTTGATCAGCACCA-TGCTGTTCCTGTTGACACACACGTGT-GGCGGgtaagcttac ... cttgggtaagATTGCCACCAAGTATCTCTTACCTGAGCTTGC
EST:
gi|22523172|gb|BU081983.1|BU081983EST: TTTCGCTTGATCAGCACCATGCTGTTCCTGTTGACACACACGTGTGGCGG ATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCC
genomic: TTTCGCTTGATCAGCACCATGCTGTTCCTGTTGACACACACGTGTGGCGGgtaagcttac ... cttgggtaagATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGTACGTTACCCGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTTTCGCTTGATCAGCACCATGCTGTTCCTGTTGACACACACGTGTGGCGGgtaagcttacaaaaagttgttatttattctttactgattgattgattattgcatattgtagaatgttatgattgagtgttaatttggatgtttcttttttaaacttgggtaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT