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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGGCAAAATGGAGTCCTTGACATTCCAAGCACACAGAGTACCACCTATCCTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactctacattttatgatttagtttaccttaatatattgcttaatattatttctcaatgtatcattaaagaacaaagaagtcggcatagaatagtct...

Basic information

species Glycine max
transcript GLYMA03G25510.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14011734|gb|BG726656.1|BG726656
EST:     CTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
genomic: CTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|254348725|gb|GR852404.1|GR852404
EST:     TGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
genomic: TGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|254338959|gb|GR847676.1|GR847676
EST:     TGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
genomic: TGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|22927667|gb|BU544806.1|BU544806
EST:     GGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAAGCAAGAAGAGCAGCTGAGAAAGCNNATGATGTGGCCAAGGTAGATGAG
genomic: GGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|254348726|gb|GR852405.1|GR852405
EST:     TGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
genomic: TGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|192315245|gb|FK009593.1|FK009593
EST:     GTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAGGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
genomic: GTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|192319610|gb|FK009592.1|FK009592
EST:     CTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAGGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
genomic: CTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|22934028|gb|BU551167.1|BU551167
EST:     TTCCAGAGTACTTAATGCAGTCCAG                         GAAGCAAGAAGAGCAGCTGAGAAAGNNNATGATGTNGCCAAGGTAGATGAG
genomic: TTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
EST: gi|254336511|gb|GR842690.1|GR842690
EST:     CTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAG                         GAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG
genomic: CTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGgtacactcta ... taaaaaacagGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAG