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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACTCATGAGGGCAGTTATCAATTCTTTAATAAACATGGAGGGTACAAAACCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGgtttgccttccactcaagttctttagaaaaaccaaaaatggaaaatatatgtatctcattctcttgtatgtgcag

Basic information

species Glycine max
transcript GLYMA13G34970.1
intron # 19
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12690565|gb|BG156901.1|BG156901
EST:     CCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAG                         TTCAAAGGAAGATTCATTGAAGGACATGCAGGGACTGGCAGGCCAACTATT
genomic: CCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGgtttgccttc ... gtatgtgcagTTCAAAGGAAGATTCATTGAAGGACATGCAGGGACTGGCAGGCCAACTATT
EST: gi|8283101|gb|BE020670.1|BE020670
EST:     CCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAG                         TTCAAAGGAAGATTCATTGAAGGACATGCAGGGACTGGCAGGCCAACTATT
genomic: CCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGgtttgccttc ... gtatgtgcagTTCAAAGGAAGATTCATTGAAGGACATGCAGGGACTGGCAGGCCAACTATT
EST: gi|7692036|gb|AW760152.1|AW760152
EST:     CCTAAATCCTGTGATGGTTNTGTCAAAAAGTTGCTTCAGCGATTGGCAAG                         TTCGAAGGAAGATTCATTGAACGACATGCAGGGACTGGGC-GGCCAACTAT
genomic: CCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGgtttgccttc ... gtatgtgcagTTCAAAGGAAGATTCATTGAAGGACATGCAGGGACTGG-CAGGCCAACTAT