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GGTTCATGGATAGTAAAGCAGAGTGTGGGAAAGAAGGCATGCCTAGTTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttgcatgattatcagtggtatagcaacttgttaggaaaatcaagataattagaataaatgtattattgtgtttgctattttgtgttgatgtgt...
species | Glycine max |
transcript | GLYMA12G29750.1 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTEST: gi|7326871|gb|AW620669.1|AW620669
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTT
EST: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTEST: gi|22933067|gb|BU550206.1|BU550206
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTT
EST: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTEST: gi|192327435|gb|FK018167.1|FK018167
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTT
EST: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTEST: gi|209705116|gb|BW653339.1|BW653339
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTT
EST: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTEST: gi|209722676|gb|BW654683.1|BW654683
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTT
EST: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTEST: gi|19053571|gb|BM732238.1|BM732238
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTT
EST: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTEST: gi|213610817|gb|DB975070.1|DB975070
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTT
EST: TTGGTCAAGCACTGGAAATCAATAAATTCCAGGGAAGTAACTATTTGGAG CTTGGAGTTGATATTGGATCATCAACTG-TACATCATGGTGTTGTGAGTCT
genomic: TTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttg ... tcaatttcagCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGA-GGTGTTGTGAGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTCATGGATAGTAAAGCAGAGTGTGGGAAAGAAGGCATGCCTAGTTGGTCAAGCACTGGAAATCAATTATTTCCAGGGAAGTAACTATTTGGAGgtaaattttgcatgattatcagtggtatagcaacttgttaggaaaatcaagataattagaataaatgtattattgtgtttgctattttgtgttgatgtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG