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AGAACTGTCCTCTGCTCATGGAGGAATACTCCCACACTCTGTCTTGTCCACTGAACAAATCATCCAATTAGCTTCTCAAAAACCAAACTCGCTGGAACAGgcaagttctaagctatgtagtttagttttgtgctcgtgttttgatctatatctaaactaaacaaagatttaatttgagaaaaattgtcagaagcaacttt...
species | Glycine max |
transcript | GLYMA09G34860.1 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: CTGAACAAATCATCCAATTAGCTTCTCAAAAACCAAACTCGCTGGAACAG TTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATAEST: gi|213593112|gb|DB975359.1|DB975359
genomic: CTGAACAAATCATCCAATTAGCTTCTCAAAAACCAAACTCGCTGGAACAGgcaagttcta ... gtgtgcacagTTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATA
EST: AACAAATCATCCAATTAGCGGT-TCAAGTAAA--AAACTCGCTCGAACAG TTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATAEST: gi|214007489|gb|DB987332.1|DB987332
genomic: AACAAATCATCCAATTAGC-TTCTCAA--AAACCAAACTCGCTGGAACAGgcaagttcta ... gtgtgcacagTTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATA
EST: TGAACAAATCATCCAATTAGCTAAC-CAAAAACCAAACTCGCTCGAACAG TTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATAEST: gi|213608749|gb|DB980759.1|DB980759
genomic: TGAACAAATCATCCAATTAGCT-TCTCAAAAACCAAACTCGCTGGAACAGgcaagttcta ... gtgtgcacagTTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATA
EST: ACTCGCTCGAACAG TTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATA
genomic: ACTCGCTGGAACAGgcaagttcta ... gtgtgcacagTTGGAGAAGCTGATTGGAAAATTGAGGACAGAAAAGTATGGAAATAGAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAACTGTCCTCTGCTCATGGAGGAATACTCCCACACTCTGTCTTGTCCACTGAACAAATCATCCAATTAGCTTCTCAAAAACCAAACTCGCTGGAACAGgcaagttctaagctatgtagtttagttttgtgctcgtgttttgatctatatctaaactaaacaaagatttaatttgagaaaaattgtcagaagcaacttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagaaaaa