1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
CTGAGAGGAGGGTCGTTCCGGGTTCGGGTGCTGAAGAATTCAAGTTTGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGgtaatcattcttaatctgctgcttattgtctatttttttttgtaaccaaaactttaagctttattttgtagcaaaacatgataacaatacactttgttgtgttcag
species | Glycine max |
transcript | GLYMA16G00590.1 |
intron # | 18 |
splice site | 5' |
intron type | U2 |
EST: GTGACCCTCAGCTGTGATCATCGTGTTATAGATG GTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATCEST: gi|192329901|gb|FK021487.1|FK021487
genomic: GTGACCCTCAGCTGTGATCATCGTGTTATAGATGgtaatcattc ... ttgtgttcagGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATC
EST: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATG GTGCAATTGGTGCCGAATGGTTAAAGGCATTCAAAG-CTATATTGAAAATCEST: gi|151404893|gb|EV274707.1|EV274707
genomic: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGgtaatcattc ... ttgtgttcagGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATC
EST: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATG GTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATCEST: gi|18732669|gb|BM527176.1|BM527176
genomic: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGgtaatcattc ... ttgtgttcagGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATC
EST: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATG GTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATCEST: gi|14125335|gb|BG789773.1|BG789773
genomic: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGgtaatcattc ... ttgtgttcagGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATC
EST: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATG GTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATC
genomic: TGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGgtaatcattc ... ttgtgttcagGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGAGAGGAGGGTCGTTCCGGGTTCGGGTGCTGAAGAATTCAAGTTTGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGgtaatcattcttaatctgctgcttattgtctatttttttttgtaaccaaaactttaagctttattttgtagcaaaacatgataacaatacactttgttgtgttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG