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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTATGCAGATATATATACCTCTAGAGTGTCAAATTTTTTATATTACACACCGTTTATGTATTTTGGCTCTCAGGAACAGgtatgcagttcatcttttttcccttacctcccttccaaatccttaaaagcattaggttattatttcggttataaacttagacatttttctttcttgttccgccacag

Basic information

species Glycine max
transcript GLYMA15G21240.1
intron # 15
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G21240.1 (Glycine max), 5'ss of exon 15
lower sequence: Vv05s0020g00880.t01 (Vitis vinifera), 5'ss of exon 16
GTATGCAGATATATATACCTCTAGAGTGTCAAATTTTTTATATTACACACCGTTTATGTATTTTGGCTCTCAGGAACAGgtatgcagttcatctt--ttttcccttacctcccttccaaatccttaaaagcattaggttattatttcggttataaactta-gacatttttctttcttgttccgccacag
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GTATGCTGATATTTACACCTCTAGGGTCTCAAATTTCCTACATTATACACCCTTTATGTATTTTCACTCACAGGAACAGgtattcagagtattatggctttctgcatcatattttctgtcttgtttttacccccattatattgcataaataggtaggtcacgacaaggacaaagggcgt----------