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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGATGAATTGGAGAGACATGAGGACTACTTTGTGAACTTGGCCATTCAACTTCTTACTACTTACCAGgttcttattgccctttgctgattcaaataatgaatgtataatgacagccacctttttgcttccctccattttttccccattggttgtatgacctgctatttgtgtgcag

Basic information

species Glycine max
transcript GLYMA10G43840.1
intron # 14
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G43840.1 (Glycine max), 5'ss of exon 14
lower sequence: Vv13s0067g03850.t01 (Vitis vinifera), 5'ss of exon 14
TGATGAATTGGAGAGACATGAGGACTACTTTGTGAACTTGGCCATTCAACTTCTTACTACTTACCAGgt-tcttattgccctttgc----tgattcaaataatgaatgtataatgacagccacc-----tttttgcttccctccattttttccccattggttgtatgacctgctat------ttgtgtgcag-----
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TGATGAATTGGAGGAACATGAGGACTATTTTGTACACTTGGCCATTGGTCTCCTTTCTTCTTACAAGgtatcaaactgtcaattacattctttctccagtgtcttaaatttggagatagcgttcaatgctgtatgctatgatttaaattttccttacttcctgttcaatctgggatgcaaccttttatacgttacag