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TGCACTCCAACATCAGCCGATTGTCAATGCAGTCATTGATGGTGATGATATTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatcagccacctttatcttttctcttttactttgtttatgtagagaaatcaatcaatcattatactatacttttgatgaaacttagccatttgcg...
species | Glycine max |
transcript | GLYMA02G46200.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATEST: gi|12688362|gb|BG154698.1|BG154698
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACCTTGCTGATEST: gi|151411405|gb|EV281216.1|EV281216
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATEST: gi|13180740|gb|BG352080.1|BG352080
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATEST: gi|192317501|gb|FK007539.1|FK007539
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATEST: gi|6847358|gb|AW349648.1|AW349648
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATNNAGAGATTATATAGATATCAGCATAGCTGTTNGTANNCCAAAG GGCCTTGTNGTANCGGTTATNNNNAATGCTGATACCATGAACTTTGCTGATEST: gi|16284571|gb|BI946159.1|BI946159
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATEST: gi|16279466|gb|BI943451.1|BI943451
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTTCGAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATEST: gi|192319333|gb|FK009875.1|FK009875
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATEST: gi|298167625|gb|HO012888.1|HO012888
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
EST: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAG GGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
genomic: TTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatca ... gccattccagGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCACTCCAACATCAGCCGATTGTCAATGCAGTCATTGATGGTGATGATATTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGgtttttatcagccacctttatcttttctcttttactttgtttatgtagagaaatcaatcaatcattatactatacttttgatgaaacttagccatttgcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT