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GTGTTCCGTTCATACTAAAAGCAGGGAAGGCACTAAATTCTAGAAAGGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcattgtaacttttgatatactggtgttctctctttaacatgcttttgtttgtcatgcatctcttgttgtctgatgtctatatcaatcttgaaag...
species | Glycine max |
transcript | GLYMA19G24250.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAGEST: gi|254346861|gb|GR856583.1|GR856583
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
EST: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAGEST: gi|254334915|gb|GR844700.1|GR844700
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
EST: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAGEST: gi|151404199|gb|EV274009.1|EV274009
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
EST: GGCAGAGATCAGGGTTCAATCCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAGEST: gi|254338293|gb|GR849818.1|GR849818
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
EST: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAGEST: gi|254338292|gb|GR849817.1|GR849817
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
EST: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAGEST: gi|105633931|gb|DW247294.1|DW247294
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
EST: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAGATGAGTTTGTTATCCGCCTACAACCTTTAGAAGEST: gi|37994077|gb|CF805823.1|CF805823
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
EST: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGT GTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
genomic: GGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcatt ... acatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTTCCGTTCATACTAAAAGCAGGGAAGGCACTAAATTCTAGAAAGGCAGAGATCAGGGTTCAATTCAAGGATGTCCCTGGTGATATTTTCAAGTgtatgtcattgtaacttttgatatactggtgttctctctttaacatgcttttgtttgtcatgcatctcttgttgtctgatgtctatatcaatcttgaaag
- - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG