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ATGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTGgttagtatcttttatcttttggagtatgctctgttatatcatgttttgtcactcatcctccacacacaaaaaaatgaatatgttctttctttgttttatt...
species | Glycine max |
transcript | GLYMA08G42380.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTG CCACACCCTGATGTCAAACC-ATGGCATATGCAAACAACTTCCTTCCGGEST: gi|193644816|gb|FK591702.1|FK591702
genomic: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTGgttagtatct ... gaatatgcagCCACACCCTGATGTCAAACCTATGGCATATGCAAACAACTTCCT-CCGG
EST: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTG CCACACCCTGATGTCAAACCTATGGEST: gi|298179620|gb|HO024835.1|HO024835
genomic: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTGgttagtatct ... gaatatgcagCCACACCCTGATGTCAAACCTATGG
EST: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTG CCACACCCTGATGTCAAACCTATGGCATATGCAAEST: gi|21677698|gb|BQ630049.1|BQ630049
genomic: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTGgttagtatct ... gaatatgcagCCACACCCTGATGTCAAACCTATGGCATATGCAA
EST: TATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTG CCACACCCTGATGTCAAACCTATGGCATATGCAAACAACTTCCTCCGGATGEST: gi|207769370|gb|GD741600.1|GD741600
genomic: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTGgttagtatct ... gaatatgcagCCACACCCTGATGTCAAACCTATGGCATATGCAAACAACTTCCTCCGGATG
EST: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTG CCACACCCTGATGTCAAACC-ATGGCATATGCAAAACAACTTCCTCCGGAA
genomic: GATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTGgttagtatct ... gaatatgcagCCACACCCTGATGTCAAACCTATGGCATATGCAAA-CAACTTCCTCCGGA-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAACATTGTCACATTTTCAGCGGTGgttagtatcttttatcttttggagtatgctctgttatatcatgttttgtcactcatcctccacacacaaaaaaatgaatatgttctttctttgttttatt
- - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctccac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaaat