1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAAGCTGAGAAGATCATTGGATGCTCTGCTGATGATCTAGATAACCTTAAATCACAAgtaacatcagttacccttcgctaattattggagcacgatgataaactgctattttaatattaaaccaaataccttgtctatttcag
species | Glycine max |
transcript | GLYMA17G08660.2 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TGCTCTGCTTGATGATCTAGATAACCTTAAATCACAA GAGGGAGAAGTTAATCCTTATCAGATGACATTGAAGGAAGCTACTTGGGCTEST: gi|31310108|gb|CD395311.1|CD395311
genomic: TGCTCTGC-TGATGATCTAGATAACCTTAAATCACAAgtaacatcag ... tctatttcagGAGGGAGAAGTTAATCCTTATCAGATGACATTGAAGGAAGCTACTTGGGCT
EST: AGAAGATCATTGGATGCTCTGCTGATGATCTAGATAACCTTAAATCACAA GAGGGAGAAGTTAATCCTTATCAGATGACATTGAAGGAAGCTACTTGGGCT
genomic: AGAAGATCATTGGATGCTCTGCTGATGATCTAGATAACCTTAAATCACAAgtaacatcag ... tctatttcagGAGGGAGAAGTTAATCCTTATCAGATGACATTGAAGGAAGCTACTTGGGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGCTGAGAAGATCATTGGATGCTCTGCTGATGATCTAGATAACCTTAAATCACAAgtaacatcagttacccttcgctaattattggagcacgatgataaactgctattttaatattaaaccaaataccttgtctatttcag
- - - - - AGATCA
- - - - - - - - - - - - - GCTGAT