1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AGTTATGTTGAAATTTCTGAGTCACTCGGTGTTGAAAAACCATCAGATATTTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAGgtatgaatgtttttcttagtccatcatttaatttttttaagttaaattttatccattatctcttaaacttgttacgttatcaataaacttagtccatgtc...
species | Glycine max |
transcript | GLYMA13G35120.2 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAG GTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACAEST: gi|15337282|gb|BI497938.1|BI497938
genomic: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAGgtatgaatgt ... tctgtttcagGTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACA
EST: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCGGCAG GTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACAEST: gi|208178716|gb|GD977885.1|GD977885
genomic: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAGgtatgaatgt ... tctgtttcagGTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACA
EST: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAG GTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACAEST: gi|208249709|gb|GE045444.1|GE045444
genomic: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAGgtatgaatgt ... tctgtttcagGTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACA
EST: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAG GTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACAEST: gi|193384375|gb|FK351837.1|FK351837
genomic: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAGgtatgaatgt ... tctgtttcagGTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACA
EST: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAG GTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACA
genomic: TTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAGgtatgaatgt ... tctgtttcagGTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTTATGTTGAAATTTCTGAGTCACTCGGTGTTGAAAAACCATCAGATATTTTATTTGTCACTGATGTATATCAAGAAGCCACAGCTGCAACGGCTGCAGgtatgaatgtttttcttagtccatcatttaatttttttaagttaaattttatccattatctcttaaacttgttacgttatcaataaacttagtccatgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG