1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
AAAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattctggttgttatatatttcttttatctgtattaatctgtgttgtgatgaaaattaagcatatcatttttgctatttctctccttcctttgag...
species | Glycine max |
transcript | GLYMA11G09370.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAG GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTEST: gi|208154105|gb|GD954402.1|GD954402
genomic: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattc ... ctaaaaccagGTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
EST: AAGATTG-TTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAG GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTEST: gi|208190742|gb|GD991390.1|GD991390
genomic: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattc ... ctaaaaccagGTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
EST: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTGCTGAGGGAAGAG GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTEST: gi|22523112|gb|BU081923.1|BU081923
genomic: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattc ... ctaaaaccagGTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
EST: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAG GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTEST: gi|14259145|gb|BG882053.1|BG882053
genomic: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattc ... ctaaaaccagGTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
EST: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAG GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTEST: gi|209718163|gb|BW657809.1|BW657809
genomic: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattc ... ctaaaaccagGTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
EST: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAG GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTEST: gi|192294436|gb|FG987365.1|FG987365
genomic: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattc ... ctaaaaccagGTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
EST: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAG GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
genomic: AAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattc ... ctaaaaccagGTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGCCTACTGCGGGAAGAGgtatgcattctggttgttatatatttcttttatctgtattaatctgtgttgtgatgaaaattaagcatatcatttttgctatttctctccttcctttgag
- - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccttc