1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AGATATATTTGAGCAGCCCGAGCAAGACATGCCCCATGCCATCAATGTGACTCCAGCGGAGCAGGAGGCAATTGGAAGGgtatgtcactccttcttgtcgtctaatatacgtgccgttgccattttcattttcatttctgctgattgatttttacttattattcgtag
species | Glycine max |
transcript | GLYMA08G23930.2 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TGCCCCATGCCATCAATGTGACTCCAGCGGAGCAGGAGGCAATTGGAAGG CTCGAGGCTATGGGATTTGATAGAGCCTCGGTGATAGAGGCATTTTTGGCAEST: gi|193438735|gb|FK401914.1|FK401914
genomic: TGCCCCATGCCATCAATGTGACTCCAGCGGAGCAGGAGGCAATTGGAAGGgtatgtcact ... ttattcgtagCTCGAGGCTATGGGATTTGATAGAGCCTCGGTGATAGAGGCATTTTTGGCA
EST: TGCCCCATGCCATCAATGTGACTCCAGCGGAGCAGGAGGCAATTGGAAGG CTCGAGGCTATGGGATTTGATAGAGCCTCGGTGATAGAGGCATTTTTTGGC
genomic: TGCCCCATGCCATCAATGTGACTCCAGCGGAGCAGGAGGCAATTGGAAGGgtatgtcact ... ttattcgtagCTCGAGGCTATGGGATTTGATAGAGCCTCGGTGATAGAGGCATTTTT-GGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGATATATTTGAGCAGCCCGAGCAAGACATGCCCCATGCCATCAATGTGACTCCAGCGGAGCAGGAGGCAATTGGAAGGgtatgtcactccttcttgtcgtctaatatacgtgccgttgccattttcattttcatttctgctgattgatttttacttattattcgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG