1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGTGAACCCAACGCTCGCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAAgtaagtccttaataaaactctttcttggccttacttgtgctctggcagtaaattatttgtactaacacaaacttaactctaggaataaaattgatactat...
species | Glycine max |
transcript | GLYMA04G06760.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAA TTATCTGGAACATCTCCCGAGCTTGTTAATEST: gi|17153432|gb|BM143374.1|BM143374
genomic: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAAgtaagtcctt ... ctgtttacagTTATCTGGAGCATCTCCCGAGCTTGTTAAT
EST: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAA TTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTGEST: gi|26058288|gb|CA801202.1|CA801202
genomic: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAAgtaagtcctt ... ctgtttacagTTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTG
EST: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAA TTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTGEST: gi|14126759|gb|BG791197.1|BG791197
genomic: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAAgtaagtcctt ... ctgtttacagTTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTG
EST: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAA TTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTGEST: gi|9563873|gb|BE473382.1|BE473382
genomic: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAAgtaagtcctt ... ctgtttacagTTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTG
EST: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAA TTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTG
genomic: GCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAAgtaagtcctt ... ctgtttacagTTATCTGGAGCATCTCCCGAGCTTGTTAATAAGTTGATACCTGACCATGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGTGAACCCAACGCTCGCCTGCCAAATGGTCGCCCATTTCCCCCTCTATTTAACTTCAAACAGGAAgtaagtccttaataaaactctttcttggccttacttgtgctctggcagtaaattatttgtactaacacaaacttaactctaggaataaaattgatactat
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