1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTTTGAGGGACAGATCTCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAGgtgcatatctatttacttaaaatataccgagtttcttgactctggtttctgccatcagtagtctaattgagttgatttttggattgtccaatctgaaata...
species | Glycine max |
transcript | GLYMA03G16660.2 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAG GGTATTGACACCAGCCGAAATTGATGATTATTTGGCTEST: gi|22933042|gb|BU550181.1|BU550181
genomic: TCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAGgtgcatatct ... aatgttgcagGGTATTGACACCAGCCGAAATTGATGATTATTTGGCT
EST: TCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAG GGTATTGACACCAGCCGAAATTGATGATTATTTGGCTGAAGTAGAATAATGEST: gi|6747141|gb|AW317597.1|AW317597
genomic: TCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAGgtgcatatct ... aatgttgcagGGTATTGACACCAGCCGAAATTGATGATTATTTGGCTGAAGTAGAATAATG
EST: TCTGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAG GGTATTGACACCAGCCGAAATTGATGATTATTTGGCTGAAGTAGAATAATGEST: gi|12772361|gb|BG237288.1|BG237288
genomic: TCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAGgtgcatatct ... aatgttgcagGGTATTGACACCAGCCGAAATTGATGATTATTTGGCTGAAGTAGAATAATG
EST: GAAAAAACATTGGAAATTGGCATTAATCGGTGCTGATTAAAAATTTTCAG GGTATTGACACCAGCCCGAA-TTGATGATTATTTGGCTGAAGTAGAATAA
genomic: GAAAAAACATTG-AAATTGGCAT-AATCGGTGCTGAT-AAAAATTT-CAGgtgcatatct ... aatgttgcagGGTATTGACACCAGCC-GAAATTGATGATTATTTGGCTGAAGTAGAATAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGAGGGACAGATCTCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAGgtgcatatctatttacttaaaatataccgagtttcttgactctggtttctgccatcagtagtctaattgagttgatttttggattgtccaatctgaaata
- - - - - - - - - - - - - - - - - - - - - - - - GCTGAT