1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TTTGAGCACGACACTGTTTTAATACCAAAGGAAACTTCCTGGTTTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccctaattcaacttggattagatcttttcctgtgatacaagttttcttattcgggcttttgcattgcatttattaaatgatatcaatggagct...
species | Glycine max |
transcript | GLYMA01G41570.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTEST: gi|27424736|gb|CA936256.1|CA936256
genomic: CAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
EST: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTEST: gi|105632323|gb|DW246412.1|DW246412
genomic: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
EST: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTEST: gi|13312570|gb|BG406221.1|BG406221
genomic: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
EST: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTEST: gi|5761044|gb|AI966407.1|AI966407
genomic: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
EST: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTEST: gi|10843865|gb|BF067113.1|BF067113
genomic: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
EST: CAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTEST: gi|209715753|gb|BW677247.1|BW677247
genomic: CAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
EST: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTEST: gi|9901990|gb|BE610958.1|BE610958
genomic: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
EST: TTGGATATTACCCAGATGGCTACTTCATGCCAGTTTTACCACCACAATCA ACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
genomic: TTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccc ... tgcttcacagACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGAGCACGACACTGTTTTAATACCAAAGGAAACTTCCTGGTTTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAgtatgatccctaattcaacttggattagatcttttcctgtgatacaagttttcttattcgggcttttgcattgcatttattaaatgatatcaatggagct
- - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG