1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CTGTGGCACTGCAATGGAATATGATTCAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAGgtacagtcctacgtactatacccttgaacctctgttctaactctatcaatgtgtatattttctgcatatgtagcacaataatttttaattttgttttgta...
species | Glycine max |
transcript | GLYMA17G14240.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CCTGAGTGTGAG GTATGCCTGAAAATC-GATTTATTGTTCCAGCAATGGGAGATCATTAATAEST: gi|9258401|gb|BE346548.1|BE346548
genomic: CCTGAGTG-GAGgtacagtcct ... ttacatacagGTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATA
EST: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAG GTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAGEST: gi|16996417|gb|BM085789.1|BM085789
genomic: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAGgtacagtcct ... ttacatacagGTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAG
EST: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAG GTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAGEST: gi|6718461|gb|AW306108.1|AW306108
genomic: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAGgtacagtcct ... ttacatacagGTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAG
EST: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAG GTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAGEST: gi|9259613|gb|BE347760.1|BE347760
genomic: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAGgtacagtcct ... ttacatacagGTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAG
EST: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAG GTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAGEST: gi|192317109|gb|FK007862.1|FK007862
genomic: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAGgtacagtcct ... ttacatacagGTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAG
EST: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAG GTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAG
genomic: CAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAGgtacagtcct ... ttacatacagGTATGCCTGAAAATCATATTTATTGTTCCAGCAATGGGAGATCATTAATAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTGGCACTGCAATGGAATATGATTCAACTTCAAGATTGATTACATTACCAGAAGGAAGTAACGCCTGAGTGGAGgtacagtcctacgtactatacccttgaacctctgttctaactctatcaatgtgtatattttctgcatatgtagcacaataatttttaattttgttttgta
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG