1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
TATTCATTCTGCTTCAGATCTTCGGCCACGGACAACTCTCTGTGGAGACTACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaacttacatcatgcttttgtttctatacaatgtgccacagcacaactgataatggaaactcccacatgtctgttgtattttcag
species | Glycine max |
transcript | GLYMA11G07910.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAG ACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCTEST: gi|208154342|gb|GD955395.1|GD955395
genomic: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaact ... gtattttcagACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
EST: CTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAG ACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCTEST: gi|192324841|gb|FK015352.1|FK015352
genomic: CTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaact ... gtattttcagACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
EST: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAG ACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCTEST: gi|254331134|gb|GR843253.1|GR843253
genomic: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaact ... gtattttcagACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
EST: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAG ACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCTEST: gi|120533133|gb|EH261266.1|EH261266
genomic: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaact ... gtattttcagACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
EST: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAG ACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCTEST: gi|254331133|gb|GR843252.1|GR843252
genomic: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaact ... gtattttcagACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
EST: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAG ACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCTEST: gi|120533498|gb|EH261631.1|EH261631
genomic: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaact ... gtattttcagACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
EST: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAG ACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
genomic: ACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaact ... gtattttcagACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTTCCCTGGTCATGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTCATTCTGCTTCAGATCTTCGGCCACGGACAACTCTCTGTGGAGACTACTTTTATAATTATTTTACTCGTGGTCTGGACATATTATTTGATGGACAGgtttgtaacttacatcatgcttttgtttctatacaatgtgccacagcacaactgataatggaaactcccacatgtctgttgtattttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA