1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GAAGAAAAGTAAATTGGTTGGGATCGTAGATGATGAAGAGAAGGAAGCACAGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttccacattcttcacctcttatttttgtttttatatagaactagatcatattatgttgtttttttatcactgcattgacatttttgccttgaa...
species | Glycine max |
transcript | GLYMA08G24660.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAAEST: gi|207838463|gb|GD812001.1|GD812001
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAA
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAAEST: gi|151410856|gb|EV280671.1|EV280671
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAA
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTTCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAAEST: gi|298174867|gb|HO014784.1|HO014784
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAA
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAAEST: gi|192296695|gb|FG991263.1|FG991263
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAA
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAAEST: gi|16348613|gb|BI974208.1|BI974208
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAA
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAAEST: gi|254321939|gb|GR837353.1|GR837353
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAA
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAAEST: gi|254338240|gb|GR849765.1|GR849765
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAGTTCCATGGTAAA
EST: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATT TTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAG
genomic: AGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttc ... ttgcatccagTTGACTCCTAAGGAAGCCTTTCGGATGATCTCTCATAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGAAAAGTAAATTGGTTGGGATCGTAGATGATGAAGAGAAGGAAGCACAGAAGACAAGGGAAATTCGCATTGAAAGGACAGATGAATTTGGGAGAATTgtaagttttccacattcttcacctcttatttttgtttttatatagaactagatcatattatgttgtttttttatcactgcattgacatttttgccttgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA