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CATGCCTTCACCTCCTCCATTGAACCTAAACCCAAAAGCTGTACTGGATCCTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttgaaattatcagtttcattaatgtgataacttaggcttgaaaatatctatttaatttgaatgcattggtattataaaaaagttttacagtat...
species | Glycine max |
transcript | GLYMA06G08590.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAG GAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCAEST: gi|51343508|gb|CO984241.1|CO984241
genomic: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttg ... tctggtgcagGAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
EST: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAG GAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCAEST: gi|7691547|gb|AW759672.1|AW759672
genomic: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttg ... tctggtgcagGAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
EST: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAG GAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCAEST: gi|21888120|gb|BQ741333.1|BQ741333
genomic: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttg ... tctggtgcagGAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
EST: CAATATCCTTATCTGAG GAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCAEST: gi|10846106|gb|BF069087.1|BF069087
genomic: CAATATCCTTATCTGAGgtttgctttg ... tctggtgcagGAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
EST: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAG GAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCAEST: gi|151401552|gb|EV271366.1|EV271366
genomic: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttg ... tctggtgcagGAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
EST: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAG GAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCAEST: gi|151402828|gb|EV272641.1|EV272641
genomic: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttg ... tctggtgcagGAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
EST: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAG GAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
genomic: CTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttg ... tctggtgcagGAATATTCTCTAAGTCCTCAAGGAGTCACATCGTTGACAACTCCTCATGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGCCTTCACCTCCTCCATTGAACCTAAACCCAAAAGCTGTACTGGATCCTGGCGCATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGgtttgctttgaaattatcagtttcattaatgtgataacttaggcttgaaaatatctatttaatttgaatgcattggtattataaaaaagttttacagtat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ataaaaaa