1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGGTTGGAAGGTTGTATCAATACACGGGGACAAAGCCCAACATGATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctattttacattggaattattgttggctcaaaagttagaacaaatttatgaattggtatttatgtttgactgttttcttcatgatattgtggctt...
species | Glycine max |
transcript | GLYMA01G01390.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATG ATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTAEST: gi|9983987|gb|BE658095.1|BE658095
genomic: CGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctatt ... caatgagcagATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
EST: ATCGCACAAAGGCANNNNCATTGTTCAAGAATGCAAGCTGTCCTTTGATG ATTGCTACTGATGTNGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTAEST: gi|193312653|gb|FK276591.1|FK276591
genomic: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctatt ... caatgagcagATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
EST: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATG ATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTAEST: gi|6915515|gb|AW397045.1|AW397045
genomic: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctatt ... caatgagcagATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
EST: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATG ATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTAEST: gi|16277496|gb|BI942413.1|BI942413
genomic: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctatt ... caatgagcagATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
EST: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATG ATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTAEST: gi|9983884|gb|BE657992.1|BE657992
genomic: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctatt ... caatgagcagATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
EST: ATCGCACAAANNNACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATG ATTGCTACTGATGTGNNCGCACGAGGATTGGATATTCCAGATGTTGAAGTAEST: gi|58022098|gb|CX708839.1|CX708839
genomic: ATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctatt ... caatgagcagATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
EST: TCATTGTTCAAGAATGCAAGCTGTCCTTTGATG ATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
genomic: TCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctatt ... caatgagcagATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGTTGGAAGGTTGTATCAATACACGGGGACAAAGCCCAACATGATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGgtaacctattttacattggaattattgttggctcaaaagttagaacaaatttatgaattggtatttatgtttgactgttttcttcatgatattgtggctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG