1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TCTTCAATGTTCTCTCCACTGGATCGAGGCCTTTTCTCACCTTGGAGTGGTTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaacaagcaatgtcacgtggggattttgacttttttcatgtttgttgagctcattatagtcatttgcag
species | Glycine max |
transcript | GLYMA20G30120.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAG ATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGGEST: gi|192311913|gb|FK004222.1|FK004222
genomic: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaac ... tcatttgcagATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGG
EST: TTTAAAGCATCTGGGTATCTCAGCTGAACCAAAACCTCTTCTTCACATAG ATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGGEST: gi|151402645|gb|EV272458.1|EV272458
genomic: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaac ... tcatttgcagATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGG
EST: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAG ATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGGEST: gi|192334065|gb|FK026222.1|FK026222
genomic: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaac ... tcatttgcagATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGG
EST: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAG ATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGGEST: gi|19348858|gb|BM893390.1|BM893390
genomic: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaac ... tcatttgcagATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGG
EST: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAG ATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGGEST: gi|192311912|gb|FK004221.1|FK004221
genomic: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaac ... tcatttgcagATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGG
EST: TTTAAAGCATCTGGGTATCTCAGCTGAACCAAAACCTCTTCTTCACATAG ATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGG
genomic: TTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaac ... tcatttgcagATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTTCAATGTTCTCTCCACTGGATCGAGGCCTTTTCTCACCTTGGAGTGGTTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGgtaacaaaacaagcaatgtcacgtggggattttgacttttttcatgtttgttgagctcattatagtcatttgcag
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