1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGCCGCCATTCGCGCCCTGGCCGCCGTCATAAGATCCAGCCAGGCTACCACCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttcaactctctctctccctctctctctctctctctgatgatttattcttcttcattcctttgcag
species | Glycine max |
transcript | GLYMA19G45180.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAA TCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGEST: gi|18730532|gb|BM525930.1|BM525930
genomic: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttc ... tcctttgcagTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
EST: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAA TCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGEST: gi|298192424|gb|HO036506.1|HO036506
genomic: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttc ... tcctttgcagTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
EST: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCTGATTCTCTCAAA TCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGEST: gi|298178775|gb|HO024510.1|HO024510
genomic: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttc ... tcctttgcagTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
EST: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAA TCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGEST: gi|18735539|gb|BM528820.1|BM528820
genomic: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttc ... tcctttgcagTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
EST: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAA TCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGEST: gi|10847206|gb|BF071500.1|BF071500
genomic: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttc ... tcctttgcagTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
EST: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAA TCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGEST: gi|6135022|gb|AW133415.1|AW133415
genomic: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttc ... tcctttgcagTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
EST: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAA TCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
genomic: CCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttc ... tcctttgcagTCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCGCCATTCGCGCCCTGGCCGCCGTCATAAGATCCAGCCAGGCTACCACCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAAgtattggttcaactctctctctccctctctctctctctctctgatgatttattcttcttcattcctttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG