1 5' 3' |
CCGTGCTTCACTCACTTTCGGAATACGACCAGTTCACCATTGAACAGATGCCTATGAGCAGCAAGATTTGCCTCTCTGAGGATTACGGCAAAACTTACAGgtacggttttgaatgtcatgattcagaatactctctttttgttctgcttgaatcaacttcttcagccaaattaaatagcttccggcccccctgttagata...
species | Glycine max |
transcript | GLYMA16G14690.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTATGAGCAGCAAGATTTGCCTCTCTGAGGATTACGGCAAAACTTACAG GAAATGGGGTTTTGAAAAGCTTGTGTATAGAGACTCAATTACAGGAATTCGEST: gi|12774808|gb|BG239756.1|BG239756
genomic: CCTATGAGCAGCAAGATTTGCCTCTCTGAGGATTACGGCAAAACTTACAGgtacggtttt ... aatttaacagGAAATGGGGTTTTGAAAAGCTTGTGTATAGAGACTCAATTACAGGAATTCG
EST: CCTATGAGCAGCAAGATTTGCCTCTCTGAGGATTACGGCAAAACTTACAG GAAATGGGGTTTTGAAAAGCT
genomic: CCTATGAGCAGCAAGATTTGCCTCTCTGAGGATTACGGCAAAACTTACAGgtacggtttt ... aatttaacagGAAATGGGGTTTTGAAAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGTGCTTCACTCACTTTCGGAATACGACCAGTTCACCATTGAACAGATGCCTATGAGCAGCAAGATTTGCCTCTCTGAGGATTACGGCAAAACTTACAGgtacggttttgaatgtcatgattcagaatactctctttttgttctgcttgaatcaacttcttcagccaaattaaatagcttccggcccccctgttagata
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaattaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccccct