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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTAGCACCTGCTGCTGCTGCAGCCTCATCCTCTTCTTCATGGAATAATAGGCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGgtaggtgacacattctttcttgtgttatggaacagaacataacactaatcagttattcaaaggactaaatttaagggcaattttattaggtaatttggtg...

Basic information

species Glycine max
transcript GLYMA16G13570.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120529893|gb|EH258027.1|EH258027
EST:     GCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTG                         AAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAG
genomic: GCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGgtaggtgaca ... acttatccagAAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAG
EST: gi|6133929|gb|AW132322.1|AW132322
EST:     GCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCANAATTG                         AAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAG
genomic: GCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGgtaggtgaca ... acttatccagAAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAG