Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGCTCTTTCGCGAAACACTCCCCTTTGCCGCTGTTGTTGTTGCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttcaatcaccaattctgtgatttgtgcttttcacctgatattttggatgaatttttgtgcttacatgctgtttttggttactggatccgtaaac...

Basic information

species Glycine max
transcript GLYMA15G05570.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254346739|gb|GR856461.1|GR856461
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|7589136|gb|AW704916.1|AW704916
EST:     CAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: CAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213587815|gb|DB959639.1|DB959639
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|193323233|gb|FK292493.1|FK292493
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|209713368|gb|BW653865.1|BW653865
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213587938|gb|DB971427.1|DB971427
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213598434|gb|DB958102.1|DB958102
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213587439|gb|DB967775.1|DB967775
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213608166|gb|DB970805.1|DB970805
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|9987247|gb|BE661355.1|BE661355
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|298174952|gb|HO014869.1|HO014869
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|298189975|gb|HO031640.1|HO031640
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|7588704|gb|AW704494.1|AW704494
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|7283862|gb|AW596464.1|AW596464
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|5175444|gb|AI759777.1|AI759777
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|21601540|gb|BQ611871.1|BQ611871
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213599641|gb|DB968375.1|DB968375
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|209713447|gb|BW681488.1|BW681488
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|6502270|gb|AW203643.1|AW203643
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213620362|gb|DB961507.1|DB961507
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|24205144|gb|BU964397.1|BU964397
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213617998|gb|DB963631.1|DB963631
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|7478706|gb|AW666373.1|AW666373
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|213595648|gb|DB968528.1|DB968528
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
EST: gi|209728385|gb|BW652042.1|BW652042
EST:     GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAG                         GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA
genomic: GCTGCACCACCGAACAACTTCCCCTGTAAATCGCGTTTCGTTTGTGCAAGgtgcgtttca ... tctgctacagGTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAA