1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAGAGAATCAGTTTGGTTTTGAAGAAGGGAGGAGACGAGACAATGATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACGgtgcgttttctttcttcccatttcattttatcttcttctttctgatttctattatacctaccaattttcttatgatgttctgcgaatcttgatttgtttc...
species | Glycine max |
transcript | GLYMA15G01150.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACG TTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAAEST: gi|9565334|gb|BE474843.1|BE474843
genomic: ATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACGgtgcgttttc ... gtttggttagTTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAA
EST: ATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACG TTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAAEST: gi|21888474|gb|BQ741687.1|BQ741687
genomic: ATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACGgtgcgttttc ... gtttggttagTTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAA
EST: GGCAATATCCTCATCGAACG TTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAAEST: gi|21677910|gb|BQ630261.1|BQ630261
genomic: GGCAATATCCTCATCGAACGgtgcgttttc ... gtttggttagTTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAA
EST: ATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACG TTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAA
genomic: ATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACGgtgcgttttc ... gtttggttagTTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAGAATCAGTTTGGTTTTGAAGAAGGGAGGAGACGAGACAATGATACTGGCTGTTCTGTTTGCCAACGTTGAGGGCAATATCCTCATCGAACGgtgcgttttctttcttcccatttcattttatcttcttctttctgatttctattatacctaccaattttcttatgatgttctgcgaatcttgatttgtttc
- - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttcttccc