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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTATCTGCTTCTGCGTGGTTCTCACTCAAGTTCTTCTCTTTCTTCCCTTCTTCCTCGATCTCAATCTTCCCAACCGGATTTTGCTCTGTGGGGGGAGGGgtaaataactcaataccaatgagacttgctatactttcgttgaaaaaccattggatagatgtggaatgcgtcataccctttttctgtgtttgatggaatt...

Basic information

species Glycine max
transcript GLYMA14G02090.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7327225|gb|AW620947.1|AW620947
EST:     CTTCCTCGATCTCAATCTTCCCAACCGGATTTTGCTCTGTGGGGGGAGGG                         GATACCGTCGGACAGGTCGGTGACTCCGGGAGCTAAACCACTTCTTGTTTG
genomic: CTTCCTCGATCTCAATCTTCCCAACCGGATTTTGCTCTGTGGGGGGAGGGgtaaataact ... tctctatcagGATACCGTCGGACAGGTCGGTGACTCCGGGAGCTAAACCACTTCTTGTTTG
EST: gi|209712103|gb|BW676720.1|BW676720
EST:     CTTCCTCGATCTCAATCTTCCCAACCGGATTTTGCTCTGTGGGGGGAGGG                         GATACCGTCGGACAGGTCGGTGACTCCGGGAGCTAAACCACTTCTTGTTTG
genomic: CTTCCTCGATCTCAATCTTCCCAACCGGATTTTGCTCTGTGGGGGGAGGGgtaaataact ... tctctatcagGATACCGTCGGACAGGTCGGTGACTCCGGGAGCTAAACCACTTCTTGTTTG