1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CGAGTGCCTCAGGACCCAGGACGGCGGCGCCGTCGCCCTCGACTGGGTCTCCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTGgtctgttctaacaaaaaaaaaaaactttttttatcttccaattttttgttaatgtgaaggaaatgtgcag
species | Glycine max |
transcript | GLYMA12G01650.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTG CCAGGTTTAACCEST: gi|11413345|gb|BF425356.1|BF425356
genomic: CCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTGgtctgttcta ... aaatgtgcagCCAGGTTTAACC
EST: CCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTG CCAGGTTTAACCGGAGGTAGTGGGGATGCTTACGTGAGACACATGTTAGTTEST: gi|209717157|gb|BW657620.1|BW657620
genomic: CCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTGgtctgttcta ... aaatgtgcagCCAGGTTTAACCGGAGGTAGTGGGGATGCTTACGTGAGACACATGTTAGTT
EST: CCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTG CCAGGTTTAACCGGAGGTAGTGGGGATGCTTACGTGAGACACATGTTAGTT
genomic: CCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTGgtctgttcta ... aaatgtgcagCCAGGTTTAACCGGAGGTAGTGGGGATGCTTACGTGAGACACATGTTAGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGAGTGCCTCAGGACCCAGGACGGCGGCGCCGTCGCCCTCGACTGGGTCTCCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTGgtctgttctaacaaaaaaaaaaaactttttttatcttccaattttttgttaatgtgaaggaaatgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC