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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGCCGGAATAAATGCTTCCCCTCCAAGTTTTTTCATTCCTCTTCCACGTGCATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAGgtttcattacttctcttcatatttctatacacaacaacaattcaacgtcatcataaacataactagttacaaaacatgccatgttttttcttcttatcta...

Basic information

species Glycine max
transcript GLYMA09G38490.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151403418|gb|EV273228.1|EV273228
EST:     CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAG                         TTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
genomic: CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAGgtttcattac ... tgttttgcagTTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
EST: gi|6724437|gb|AW308836.1|AW308836
EST:     CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAG                         TTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
genomic: CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAGgtttcattac ... tgttttgcagTTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
EST: gi|151396159|gb|EV266036.1|EV266036
EST:     CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAG                         TTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAGCCGAGG
genomic: CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAGgtttcattac ... tgttttgcagTTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
EST: gi|151405951|gb|EV275766.1|EV275766
EST:     CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAG                         TTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
genomic: CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAGgtttcattac ... tgttttgcagTTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
EST: gi|22523308|gb|BU082119.1|BU082119
EST:     CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAG                         TTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG
genomic: CATGCCCTCTTCCTTGCATGATCACCACTACCACTCTTTCTTATTGCGAGgtttcattac ... tgttttgcagTTGCCAATGATGCTGATAGGAGTGAAATGTCATCTGATACCGCAACCGAGG