1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTTTTCTTTCTCTCTATCGATTCTCGAAACAAACCCTACCCTTTTTTAGTCTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattcattcatacctccatttcccgatcatttatttccctttccaattcatcatttttttcaatcctcaattgcttcgaagtcttcattttattt...
species | Glycine max |
transcript | GLYMA09G22600.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCGGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|6071962|gb|AW101349.1|AW101349
genomic: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|33387487|gb|CA850694.1|CA850694
genomic: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: TAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|298193121|gb|HO033555.1|HO033555
genomic: TAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|21285722|gb|BQ473593.1|BQ473593
genomic: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: TTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|193401185|gb|FK365466.1|FK365466
genomic: TTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|9898614|gb|BE607582.1|BE607582
genomic: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|22522487|gb|BU081298.1|BU081298
genomic: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|19269626|gb|BM885882.1|BM885882
genomic: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCG TTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
genomic: CTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattc ... gtccctgcagTTCCTAGGAATTTCAGATTATTGCAAGAGCTTGAGAGAGGTGAGAAGGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTTCTTTCTCTCTATCGATTCTCGAAACAAACCCTACCCTTTTTTAGTCTTCGAATTTTTCATAATCGTAATGGGTTCCGAAGGATCCAGCGTTGTCGgtgagcattcattcatacctccatttcccgatcatttatttccctttccaattcatcatttttttcaatcctcaattgcttcgaagtcttcattttattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctttc