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ACAAAGCTCACTGAATCGAAGCCCTTCATTTTGATTTTCTTCCTCGTCACTGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAGgtcactactaacactatcatatcatccttttttttcattccaatattaatgttttggatcttaccctgataacaaaatttgattttgatcggtaaaaaat...
species | Glycine max |
transcript | GLYMA08G21380.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGAAGGCATCTCAAG GGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTAEST: gi|213589728|gb|DB965860.1|DB965860
genomic: AGAAGGCATCTCAAGgtcactacta ... atgtgattagGGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTA
EST: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAG GGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTAEST: gi|213601433|gb|DB968735.1|DB968735
genomic: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAGgtcactacta ... atgtgattagGGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTA
EST: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAG GGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTAEST: gi|213616711|gb|DB971236.1|DB971236
genomic: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAGgtcactacta ... atgtgattagGGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTA
EST: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAG GGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTAEST: gi|213602766|gb|DB968936.1|DB968936
genomic: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAGgtcactacta ... atgtgattagGGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTA
EST: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAG GGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTAEST: gi|213616927|gb|DB959239.1|DB959239
genomic: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAGgtcactacta ... atgtgattagGGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTA
EST: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAG GGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTA
genomic: TGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAGgtcactacta ... atgtgattagGGCCATGGAGGTAACTTGGGATCCATTAGGTTTTCAACTTCGGCCGCGGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAAAGCTCACTGAATCGAAGCCCTTCATTTTGATTTTCTTCCTCGTCACTGCGCATCATGTACAGAGTTGCAGCTTCATCATTCAGAAGGCATCTCAAGgtcactactaacactatcatatcatccttttttttcattccaatattaatgttttggatcttaccctgataacaaaatttgattttgatcggtaaaaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtaaaaaa