1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTAAGAGGTAACAGTCTCTCGCCAGAAAGGAGGCAGAGACCGAGAGAGCAACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaacgcatgcgttttgaagcttccattccatttcagtttcgattttcgattcttttccctctactctgcag
species | Glycine max |
transcript | GLYMA08G08330.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAG TACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGEST: gi|298193354|gb|HO033788.1|HO033788
genomic: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaa ... tactctgcagTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAG
EST: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAG TACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGEST: gi|120531893|gb|EH260026.1|EH260026
genomic: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaa ... tactctgcagTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAG
EST: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAG TACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGEST: gi|120531742|gb|EH259875.1|EH259875
genomic: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaa ... tactctgcagTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAG
EST: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAG TACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGEST: gi|208294689|gb|GE094396.1|GE094396
genomic: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaa ... tactctgcagTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAG
EST: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAG TACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGEST: gi|7684881|gb|AW755529.1|AW755529
genomic: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaa ... tactctgcagTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAG
EST: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAG TACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGEST: gi|298198440|gb|HO039979.1|HO039979
genomic: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaa ... tactctgcagTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAG
EST: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAG TACGAGAAGGTTGAGAAGATAGGCGAGGGGACATACGGCGTCGTTTACAAG
genomic: ACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaa ... tactctgcagTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTAAGAGGTAACAGTCTCTCGCCAGAAAGGAGGCAGAGACCGAGAGAGCAACTGCACGCACTGTAACTCTCTCACCGTTTCTTCCGCTTTGATGGAACAGgttggtaaaacgcatgcgttttgaagcttccattccatttcagtttcgattttcgattcttttccctctactctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA