1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTAATTCTGATTTCTATCTCTCTCTACAATTCCAAAACCCTACCCCCTTCCAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattcaacctcttcatttcctattatcttttttcccttctctctatcaagtactcactcttgtgcttcgctaattatgtctttttggctataatt...
species | Glycine max |
transcript | GLYMA08G04710.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|192319053|gb|FK010617.1|FK010617
genomic: CAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgttcgcagTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|18716865|gb|BM522906.1|BM522906
genomic: CAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgttcgcagTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|298190494|gb|HO032615.1|HO032615
genomic: CAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgttcgcagTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CAATTCCAATTCGTCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTATGAATTTCAGATTATTAGAAGAGCTTGAGAGAGGTGAGAATGGAA
genomic: CAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgttcgcagTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTAATTCTGATTTCTATCTCTCTCTACAATTCCAAAACCCTACCCCCTTCCAATTCCAATTCATCCTCTAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattcaacctcttcatttcctattatcttttttcccttctctctatcaagtactcactcttgtgcttcgctaattatgtctttttggctataatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctcttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttctc