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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCCAGCTGGTGGCACGACATCGACGACTCTCCGGCGTGGCAGGATCGTATCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTGgtatcgtcgcgcactcttttaattccaaattagggttttatttttgtttattcgattttatttataaattttttatttgattgaattttag

Basic information

species Glycine max
transcript GLYMA07G28990.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15815680|gb|BI787955.1|BI787955
EST:     TCTTCTACAAGCTCGCCGTACTCTACGGTATCGTGACCACCGTAGCTTTG                         GTTCAACTGGCTCGGATACAATTGAGAGTGCCGGAGTACGGTTGGACCACG
genomic: TCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTGgtatcgtcgc ... tgaattttagGTTCAACTGGCTCGGATACATTTGAGAGTGCCGGAGTACGGTTGGACCACG
EST: gi|213605254|gb|DB966870.1|DB966870
EST:     TCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTG                         GTTCAACTGGCTCGGA
genomic: TCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTGgtatcgtcgc ... tgaattttagGTTCAACTGGCTCGGA
EST: gi|17400364|gb|BM177146.1|BM177146
EST:     TCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTG                         GTTCAACTGGCTCGGATACAATTGAGAGTGCCGGAGTACGGTTGGACCACG
genomic: TCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTGgtatcgtcgc ... tgaattttagGTTCAACTGGCTCGGATACATTTGAGAGTGCCGGAGTACGGTTGGACCACG
EST: gi|209712879|gb|BW679156.1|BW679156
EST:     TCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTG                         GTTCAACTGGCTCGGATACAATTGAGAGTGCCGGAGTACGGTTGGACCACG
genomic: TCTTCTACACTCTCGCCGTACTCTACGGTATCGTGGCCACCGTAGCTTTGgtatcgtcgc ... tgaattttagGTTCAACTGGCTCGGATACATTTGAGAGTGCCGGAGTACGGTTGGACCACG