1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTGTGTGAGGCAGCAACACACACAAAGAACAAAAGGCAAAGACAGAGAGAGAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatcttttcggaattgtttttgtattttcgatttcataaagtgttcttttgtataaatttgttgtcttttttccatttggggtgtgttggattgacatggatcaggtcatcatcag
species | Glycine max |
transcript | GLYMA05G37650.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCT GATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTTEST: gi|298184362|gb|HO029575.1|HO029575
genomic: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatc ... tcatcatcagGATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTT
EST: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCT GATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTTEST: gi|22931743|gb|BU548882.1|BU548882
genomic: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatc ... tcatcatcagGATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTT
EST: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCT GATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTTEST: gi|298182712|gb|HO031447.1|HO031447
genomic: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatc ... tcatcatcagGATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTT
EST: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCT GATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTTEST: gi|151394328|gb|EV264199.1|EV264199
genomic: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatc ... tcatcatcagGATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTT
EST: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCT GATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTTEST: gi|298183606|gb|HO028819.1|HO028819
genomic: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatc ... tcatcatcagGATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTT
EST: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCT GATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTT
genomic: GAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatc ... tcatcatcagGATGATGAGTGATTACAAGGTGGAGACGATCAACGATGGCATGCAAGAGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTGTGAGGCAGCAACACACACAAAGAACAAAAGGCAAAGACAGAGAGAGAAACAATGTCTTCCCCAAGCAAACGTCGAGACATGGACTTGATGAAGCTgtctgtgatcttttcggaattgtttttgtattttcgatttcataaagtgttcttttgtataaatttgttgtcttttttccatttggggtgtgttggattgacatggatcaggtcatcatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC