1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACTTTGTGTCTTTCTATCTCTCTCTTCAATTCCAAAACCCTACCCCCATCCAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattcaacctcttcacatccatcttcatttcctaatatcttttttccttctctctatcaattactcttgtggttcgctaattataattatgagtt...
species | Glycine max |
transcript | GLYMA05G35000.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|254342628|gb|GR858790.1|GR858790
genomic: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgtatgtagTTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: AATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|192319728|gb|FK011866.1|FK011866
genomic: AATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgtatgtagTTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAAEST: gi|21889833|gb|BQ743046.1|BQ743046
genomic: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgtatgtagTTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
EST: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAACTTCAGATTATTGGAAGAGCTTTGAGAGAGGTGAGAAGGGAEST: gi|24135406|gb|BU925916.1|BU925916
genomic: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgtatgtagTTCCTAGGAACTTCAGATTATTGGAAGAGC-TTGAGAGAGGTGAGAAGGGA
EST: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCG TTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
genomic: CAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattc ... atgtatgtagTTCCTAGGAACTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTTGTGTCTTTCTATCTCTCTCTTCAATTCCAAAACCCTACCCCCATCCAATTCCAATTCACCCTCAAACATGGGTTCTGAAGGTTCCACTGTCGTCGgtcagtattcaacctcttcacatccatcttcatttcctaatatcttttttccttctctctatcaattactcttgtggttcgctaattataattatgagtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctcttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttctc