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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAGAACAAACTTCTTTCACTCTTTCGCTTCTGAATCTTCAACAATGGTGCTCGAGgtaatccccgatttcccctcgtgcgttgatttcaacaagcttatcattaccaatttttagggttttttcttgatgttgcggtagcagttttttcatcgtattgatttcttcaacag

Basic information

species Glycine max
transcript GLYMA01G36990.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151394320|gb|EV264191.1|EV264191
EST:     ACTCTTTCGCTTCTGAATCTTCAACAATGGTGCTCGAG                         GCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAACGGTGATTAC
genomic: ACTCTTTCGCTTCTGAATCTTCAACAATGGTGCTCGAGgtaatccccg ... tcttcaacagGCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAACGGTGATTAC
EST: gi|6069798|gb|AW099406.1|AW099406
EST:     CAACAATGGTGCTCGAG                         GCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAACGGTGATTAC
genomic: CAACAATGGTGCTCGAGgtaatccccg ... tcttcaacagGCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAACGGTGATTAC
EST: gi|207777270|gb|GD750451.1|GD750451
EST:     CAAACTTCTTTCACTCTTTCGCTTCTGAATCTTCAACAATGGTGCTCGAG                         GCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAACGGTGATTAC
genomic: CAAACTTCTTTCACTCTTTCGCTTCTGAATCTTCAACAATGGTGCTCGAGgtaatccccg ... tcttcaacagGCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAACGGTGATTAC