1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAGAAGAGGTTGATCACTACGGTCGTCATCATCATCAACAACAACAACACTCCCAAGCTTTCTTCCAGCCTTTGGAATGTGAACCCATTCTTCAGATCGGgtaactttagactagtataaccaatttgatttgagttctattataagcttttcttaagaaagtatctcaaactactaaattttatggagcag
species | Arabidopsis thaliana |
transcript | AT1G24260.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCCCAAGCTTTCTTCCAGCCTTTGGAATGTGAACCCATTCTTCAGATCGG GTATCAGGGGCAGCAAGATGGAATGGGAGCAGGEST: gi|164154657|gb|ES062136.1|ES062136
genomic: TCCCAAGCTTTCTTCCAGCCTTTGGAATGTGAACCCATTCTTCAGATCGGgtaactttag ... tatggagcagGTATCAGGGGCAACAAGATGGAATGGGAGCAGG
EST: GCCTTTGGAATGTGAACCCATTCTTCAGATCGG GTATCAGGGGCAGCAAGATGGAATGGGAGCAGGACCAAGTGTGAATAATTA
genomic: GCCTTTGGAATGTGAACCCATTCTTCAGATCGGgtaactttag ... tatggagcagGTATCAGGGGCAACAAGATGGAATGGGAGCAGGACCAAGTGTGAATAATTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGAAGAGGTTGATCACTACGGTCGTCATCATCATCAACAACAACAACACTCCCAAGCTTTCTTCCAGCCTTTGGAATGTGAACCCATTCTTCAGATCGGgtaactttagactagtataaccaatttgatttgagttctattataagcttttcttaagaaagtatctcaaactactaaattttatggagcag
- - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT