1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTGCAAAACGCATAAGAAGAACTACATACACCGAGTACGTGATCTCTATGCACGCCGACACCATTTCGAGATCAAGCAATACCTACATTGGCAAAATCAGgtaataggaaagactttgcctagttataagacatttagaaagcgaatgtgctaatgtttccggcttaacgcgtgattatctcctctttggcag
species | Arabidopsis thaliana |
transcript | AT1G76900.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CACGCCGACACCATTTCGAGATCAAGCAATACCTACATTGGCAAAATCAG GTCTAATTTTCTGGGGACGAAGTTTATAATATACGATACACAACCAGCATAEST: gi|116440587|gb|EG483179.1|EG483179
genomic: CACGCCGACACCATTTCGAGATCAAGCAATACCTACATTGGCAAAATCAGgtaataggaa ... tctttggcagGTCTAATTTTCTGGGGACGAAGTTTATAATATACGATACACAACCAGCATA
EST: CACGCCGACACCATTTCGAGATCAAGCAATACCTACATTGGCAAAATCAG GTCTAATTTTCTGGGGACGAAGTTTATAATATACGATACACAACCAGCATA
genomic: CACGCCGACACCATTTCGAGATCAAGCAATACCTACATTGGCAAAATCAGgtaataggaa ... tctttggcagGTCTAATTTTCTGGGGACGAAGTTTATAATATACGATACACAACCAGCATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCAAAACGCATAAGAAGAACTACATACACCGAGTACGTGATCTCTATGCACGCCGACACCATTTCGAGATCAAGCAATACCTACATTGGCAAAATCAGgtaataggaaagactttgcctagttataagacatttagaaagcgaatgtgctaatgtttccggcttaacgcgtgattatctcctctttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA