1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATAAATTTGGAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatgcattgtctgcccctttgataatcgaatagcacaaatctattttacattcacagtacaaactactgacaaaaatgcattgtctgccccttt...
species | Arabidopsis thaliana |
transcript | AT2G33470.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGGAGCTGCTATGACTCTCGTCAAATCTGACATTGGTGGCAACATAACG AGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTTCAAGTACTTGTACEST: gi|164134463|gb|ES010051.1|ES010051
genomic: TTGGAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatg ... tcttgtgtagAGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTAC
EST: GACTCTCGTGAAATCTGACATTGGTGGCAACATAACG AGGTTGGAAAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTACEST: gi|124919732|gb|EH993470.1|EH993470
genomic: GACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatg ... tcttgtgtagAGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTAC
EST: CTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACG AGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGEST: gi|116453283|gb|EG495875.1|EG495875
genomic: CTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatg ... tcttgtgtagAGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTG
EST: TTGGAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACG AGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTACEST: gi|116448815|gb|EG491407.1|EG491407
genomic: TTGGAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatg ... tcttgtgtagAGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTAC
EST: TTGGAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACG AGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTACEST: gi|86077274|gb|DR373031.1|DR373031
genomic: TTGGAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatg ... tcttgtgtagAGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTAC
EST: GAGCTGCTATGACTCTCGTCAAATCTGACATTGGTGGCAACATAACG AGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTTCAAGTACTTGTAC
genomic: GAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatg ... tcttgtgtagAGGTTGGAGAAGAACTACTTATCTGATCCCGACAAGTTCAAGTACTTGTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAATTTGGAGCTGCTATGACTCTCGTGAAATCTGACATTGGTGGCAACATAACGgtaaaaaatgcattgtctgcccctttgataatcgaatagcacaaatctattttacattcacagtacaaactactgacaaaaatgcattgtctgccccttt
- - - TTGGAG
- - - - GGAGCT
- - - - - AGCTGC
- - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgcccct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agcacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agtacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acaaaaa