1 5' 3' | 2 5' 3' | 3 5' 3' |
ATGTGGATTTGCTTCCAAAAGAAAATATCTATTCGGACGAGTGAGCATGAAGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctatcattttactccactagttttgaaattttacacattcacacaataaaaaataacattttcttgaaacactaacggtcaaatcattgatatgtctatag
species | Arabidopsis thaliana |
transcript | AT5G65730.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GATCAAACTCATTCCCGGAGACTCTGCCGGTAACGGTCACCGCTTTCTAC ATGAACTCCGATAEST: gi|125225212|gb|EL239297.1|EL239297
genomic: GATCAAACTCATTCCCGGAGACTCTGCCGGTA-CGGTCACCGCTTTCTACgtaagtctat ... atgtctatagATGAACTCCGATA
EST: CATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTAC ATGAACTCCGATACGGCCACGEST: gi|125028407|gb|EL100676.1|EL100676
genomic: CATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctat ... atgtctatagATGAACTCCGATACGGCCACG
EST: TTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTAC ATGAACTCCGATACGGCCACGGTGAGAGACGAGCTAAGATTTTGAGTTCTTEST: gi|124771631|gb|EH861761.1|EH861761
genomic: TTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctat ... atgtctatagATGAACTCCGATACGGCCACGGTGAGAGACGAGCTA-GATTTTGAGTTCTT
EST: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCGCCGCTTTCTAC ATGAACTCCGATACGGCCACGGTGAGAGACGAGEST: gi|125266631|gb|EL280716.1|EL280716
genomic: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctat ... atgtctatagATGAACTCCGATACGGCCACGGTGAGAGACGAG
EST: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTAC ATGAACTCCGATACGGCCACGEST: gi|125283424|gb|EL297509.1|EL297509
genomic: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctat ... atgtctatagATGAACTCCGATACGGCCACG
EST: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTAC ATGAACTCCGATACGGEST: gi|125283846|gb|EL297931.1|EL297931
genomic: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctat ... atgtctatagATGAACTCCGATACGG
EST: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTAC ATGAACTCCGATACGGCCACGGTGAGAG
genomic: AGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctat ... atgtctatagATGAACTCCGATACGGCCACGGTGAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTGGATTTGCTTCCAAAAGAAAATATCTATTCGGACGAGTGAGCATGAAGATCAAACTCATTCCCGGAGACTCTGCCGGTACGGTCACCGCTTTCTACgtaagtctatcattttactccactagttttgaaattttacacattcacacaataaaaaataacattttcttgaaacactaacggtcaaatcattgatatgtctatag
- - - - - - - - - - - - - - - - - - - - - - - - - AGATCA