1 5' 3' | 2 5' 3' | 3 5' 3' |
CAATGTTATGTACAACGATGTTGATATGGTTTGGTTGCAAGATCCATTTCTGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaattcttcacacatctttggaaatttagtgtgttttatttatcttattctcgggttaatttttgtgtcag
species | Arabidopsis thaliana |
transcript | AT4G01770.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCCCAA ATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGAEST: gi|116377409|gb|EG420001.1|EG420001
genomic: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaat ... tttgtgtcagATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGA
EST: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAA ATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGAEST: gi|116377428|gb|EG420020.1|EG420020
genomic: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaat ... tttgtgtcagATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGA
EST: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAA ATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGAEST: gi|116384206|gb|EG426798.1|EG426798
genomic: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaat ... tttgtgtcagATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGA
EST: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCCCAA ATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGAEST: gi|116378074|gb|EG420666.1|EG420666
genomic: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaat ... tttgtgtcagATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGA
EST: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCCCAA ATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGAEST: gi|116377437|gb|EG420029.1|EG420029
genomic: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaat ... tttgtgtcagATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGA
EST: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCCCAA ATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGA
genomic: TGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaat ... tttgtgtcagATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATGTTATGTACAACGATGTTGATATGGTTTGGTTGCAAGATCCATTTCTGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGCCTCAAgtatgtgaattcttcacacatctttggaaatttagtgtgttttatttatcttattctcgggttaatttttgtgtcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG